@inproceedings{macavaney:ncur2015-shoulder,
  author = {MacAvaney, Sean and Urbain, Jay},
  title = {Automatic Recognition of Postoperative Shoulder Surgery Physical Therapy Exercises from Depth Camera Images},
  booktitle = {Proceedings of the National Conference of Undergraduate Research},
  year = {2015}
}

@inproceedings{macavaney:semeval2017-clinicaltempeval,
  author = {MacAvaney, Sean and Cohan, Arman and Goharian, Nazli},
  title = {GUIR at SemEval-2017 Task 12: A Framework for Clinical Temporal Information Extraction Domain Adaptation},
  booktitle = {Proceedings of the 11th International Workshop on Semantic Evaluation},
  year = {2017},
  doi = {10.18653/v1/S17-2180},
  pages = {1024--1029}
}

@inproceedings{macavaney:neuir2017-nyt,
  author = {MacAvaney, Sean and Hui, Kai and Yates, Andrew},
  title = {An Approach for Weakly-Supervised Deep Information Retrieval},
  booktitle = {SIGIR 2017 Workshop on Neural Information Retrieval},
  year = {2017},
  url = {https://arxiv.org/abs/1707.00189v2}
}

@inproceedings{macavaney:trec2017-car,
  author = {MacAvaney, Sean and Yates, Andrew and Hui, Kai},
  title = {Contextualized PACRR for Complex Answer Retrieval},
  booktitle = {Proceedings of the 26th Text REtrieval Conference},
  year = {2017}
}

@inproceedings{macavaney:clpsych2018-rsddtime,
  author = {MacAvaney, Sean and Desmet, Bart and Cohan, Arman and Soldaini, Luca and Yates, Andrew and Zirikly, Ayah and Goharian, Nazli},
  title = {RSDD-Time: Temporal Annotation of Self-Reported Mental Health Diagnoses},
  booktitle = {Proceedings of the Fourth Workshop on Computational Linguistics and Clinical Psychology},
  year = {2018},
  url = {https://arxiv.org/abs/1806.07916},
  doi = {10.18653/v1/W18-0618},
  pages = {168--173}
}

@inproceedings{macavaney:sigir2018-car,
  author = {MacAvaney, Sean and Yates, Andrew and Cohan, Arman and Soldaini, Luca and Hui, Kai and Goharian, Nazli and Frieder, Ophir},
  title = {Characterizing Question Facets for Complex Answer Retrieval},
  booktitle = {Proceedings of the 41st International ACM SIGIR Conference on Research and Development in Information Retrieval},
  year = {2018},
  url = {https://arxiv.org/abs/1805.00791},
  doi = {10.1145/3209978.3210135},
  pages = {1205--1208}
}

@inproceedings{macavaney:naaclsrw2018-depwembed,
  author = {MacAvaney, Sean and Zeldes, Amir},
  title = {A Deeper Look into Dependency-Based Word Embeddings},
  booktitle = {Proceedings of the NAACL-HLT 2018 Student Research Workshop},
  year = {2018},
  url = {https://arxiv.org/abs/1804.05972},
  doi = {10.18653/v1/N18-4006},
  pages = {40--45}
}

@inproceedings{macavaney:semeval2018-scienceie,
  author = {MacAvaney, Sean and Soldaini, Luca and Cohan, Arman and Goharian, Nazli},
  title = {GU IRLAB at SemEval-2018 Task 7: Tree-LSTMs for Scientific Relation Classification},
  booktitle = {Proceedings of the 12th International Workshop on Semantic Evaluation},
  year = {2018},
  url = {https://arxiv.org/abs/1804.05408},
  doi = {10.18653/v1/S18-1133},
  pages = {831--835}
}

@inproceedings{cohan:coling2018-smhd,
  author = {Cohan, Arman and Desmet, Bart and Yates, Andrew and Soldaini, Luca and MacAvaney, Sean and Goharian, Nazli},
  title = {SMHD: A Large-Scale Resource for Exploring Online Language Usage for Multiple Mental Health Conditions},
  booktitle = {Proceedings of the 27th International Conference on Computational Linguistics},
  year = {2018},
  url = {https://arxiv.org/abs/1806.05258},
  pages = {1485--1497}
}

@article{macavaney:irj2019-car,
  author = {MacAvaney, Sean and Yates, Andrew and Cohan, Arman and Soldaini, Luca and Hui, Kai and Goharian, Nazli and Frieder, Ophir},
  title = {Overcoming Low-Utility Facets for Complex Answer Retrieval},
  year = {2019},
  url = {https://link.springer.com/article/10.1007/s10791-018-9343-0},
  doi = {10.1007/s10791-018-9343-0},
  issue = {3-4},
  journal = {Information Retrieval Journal},
  pages = {395--418},
  volume = {22}
}

@inproceedings{macavaney:trec2018-car,
  author = {MacAvaney, Sean and Yates, Andrew and Goharian, Nazli and Frieder, Ophir},
  title = {PACRR Gated Expansion for TREC CAR 2018},
  booktitle = {Proceedings of the 27th Text REtrieval Conference},
  year = {2018}
}

@inproceedings{macavaney:sigir2019-radsum,
  author = {MacAvaney, Sean and Sotudeh, Sajad and Cohan, Arman and Goharian, Nazli and Talati, Ish and Filice, Ross},
  title = {Ontology-Aware Clinical Abstractive Summarization},
  booktitle = {Proceedings of the 42nd International ACM SIGIR Conference on Research and Development in Information Retrieval},
  year = {2019},
  url = {https://arxiv.org/abs/1905.05818},
  doi = {10.1145/3331184.3331319},
  pages = {1013--1016}
}

@inproceedings{macavaney:sigir2019-nyt,
  author = {MacAvaney, Sean and Yates, Andrew and Hui, Kai and Frieder, Ophir},
  title = {Content-Based Weak Supervision for Ad-Hoc Re-Ranking},
  booktitle = {Proceedings of the 42nd International ACM SIGIR Conference on Research and Development in Information Retrieval},
  year = {2019},
  url = {https://arxiv.org/abs/1707.00189},
  doi = {10.1145/3331184.3331316},
  pages = {993--996}
}

@inproceedings{macavaney:sigir2019-cedr,
  author = {MacAvaney, Sean and Yates, Andrew and Cohan, Arman and Goharian, Nazli},
  title = {CEDR: Contextualized Embeddings for Document Ranking},
  booktitle = {Proceedings of the 42nd International ACM SIGIR Conference on Research and Development in Information Retrieval},
  year = {2019},
  url = {https://arxiv.org/abs/1904.07094},
  doi = {10.1145/3331184.3331317},
  pages = {1101--1104}
}

@article{macavaney:plosone2019-hate,
  author = {MacAvaney, Sean and Yao, Hao-Ren and Yang, Eugene and Russell, Katina and Goharian, Nazli and Frieder, Ophir},
  title = {Hate speech detection: Challenges and solutions},
  year = {2019},
  url = {https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0221152},
  doi = {10.1371/journal.pone.0221152},
  journal = {PLoS ONE},
  pages = {1--16},
  volume = {14}
}

@article{delossantos:angewandte2019-antimers,
  author = {De los Santos, Zeus and MacAvaney, Sean and Russell, Katina and Wolf, Christian},
  title = {Tandem Use of Optical Sensing and Machine Learning for the Determination of Absolute Configuration, Enantiomeric and Diastereomeric Ratios, and Concentration of Chiral Samples},
  year = {2019},
  url = {https://onlinelibrary.wiley.com/doi/10.1002/anie.201912904},
  doi = {10.1002/anie.201912904},
  issue = {6},
  journal = {Angewandte Chemie International Edition},
  pages = {2440--2448},
  volume = {59}
}

@inproceedings{macavaney:wsdm2020-onir,
  author = {MacAvaney, Sean},
  title = {OpenNIR: A Complete Neural Ad-Hoc Ranking Pipeline},
  booktitle = {Proceedings of the Thirteenth ACM International Conference on Web Search and Data Mining},
  year = {2020},
  doi = {10.1145/3336191.3371864},
  pages = {845--848}
}

@inproceedings{flagg:hsdm2020-gait,
  author = {Flagg, Cristopher and Frieder, Ophir and MacAvaney, Sean and Motamedi, Gholam},
  title = {Streaming Gait Assessment for Parkinson's Disease},
  booktitle = {Proceedings of the first Workshop on Health Search and Data Mining},
  year = {2020}
}

@inproceedings{macavaney:ecir2020-multiling,
  author = {MacAvaney, Sean and Soldaini, Luca and Goharian, Nazli},
  title = {Teaching a New Dog Old Tricks: Resurrecting Multilingual Retrieval Using Zero-shot Learning},
  booktitle = {Proceedings of the 42nd European Conference on Information Retrieval Research},
  year = {2020},
  url = {https://link.springer.com/chapter/10.1007/978-3-030-45442-5_31},
  doi = {10.1007/978-3-030-45442-5_31},
  pages = {246--254}
}

@inproceedings{macavaney:ecir2020-radsigdiff,
  author = {MacAvaney, Sean and Cohan, Arman and Goharian, Nazli and Filice, Ross},
  title = {Ranking Significant Discrepancies in Clinical Reports},
  booktitle = {Proceedings of the 42nd European Conference on Information Retrieval Research},
  year = {2020},
  url = {https://link.springer.com/chapter/10.1007/978-3-030-45442-5_30},
  doi = {10.1007/978-3-030-45442-5_30},
  pages = {238----245}
}

@inproceedings{macavaney:sigir2020-cl,
  author = {MacAvaney, Sean and Nardini, Franco Maria and Perego, Raffaele and Tonellotto, Nicola and Goharian, Nazli and Frieder, Ophir},
  title = {Training Curricula for Open Domain Answer Re-Ranking},
  booktitle = {Proceedings of the 43rd International ACM SIGIR Conference on Research and Development in Information Retrieval},
  year = {2020},
  url = {https://arxiv.org/abs/2004.14269},
  doi = {10.1145/3397271.3401094},
  pages = {529--538}
}

@inproceedings{macavaney:sigir2020-eff,
  author = {MacAvaney, Sean and Nardini, Franco Maria and Perego, Raffaele and Tonellotto, Nicola and Goharian, Nazli and Frieder, Ophir},
  title = {Efficient Document Re-Ranking for Transformers by Precomputing Term Representations},
  booktitle = {Proceedings of the 43rd International ACM SIGIR Conference on Research and Development in Information Retrieval},
  year = {2020},
  url = {https://arxiv.org/abs/2004.14255},
  doi = {10.1145/3397271.3401093},
  pages = {49--58}
}

@inproceedings{macavaney:sigir2020-epic,
  author = {MacAvaney, Sean and Nardini, Franco Maria and Perego, Raffaele and Tonellotto, Nicola and Goharian, Nazli and Frieder, Ophir},
  title = {Expansion via Prediction of Importance with Contextualization},
  booktitle = {Proceedings of the 43rd International ACM SIGIR Conference on Research and Development in Information Retrieval},
  year = {2020},
  url = {https://arxiv.org/abs/2004.14245},
  doi = {10.1145/3397271.3401262},
  pages = {1573--1576}
}

@article{macavaney:arxiv2020-sledge,
  author = {MacAvaney, Sean and Cohan, Arman and Goharian, Nazli},
  title = {SLEDGE: A Simple Yet Effective Baseline for COVID-19 Scientific Knowledge Search},
  year = {2020},
  url = {https://arxiv.org/abs/2005.02365},
  journal = {arXiv},
  volume = {abs/2005.02365}
}

@inproceedings{sotudeh:semeval2020-offenseval,
  author = {Sotudeh, Sajad and Xiang, Tong and Yao, Hao-Ren and MacAvaney, Sean and Yang, Eugene and Goharian, Nazli and Frieder, Ophir},
  title = {GUIR at SemEval-2020 Task 12: Domain-Tuned Contextualized Models for Offensive Language Detection},
  booktitle = {Proceedings of the 14th International Workshop on Semantic Evaluation},
  year = {2020},
  url = {https://arxiv.org/abs/2007.14477}
}

@article{garman:medrxiv2020-sidir,
  author = {Garman, Joe and MacAvaney, Sean and Yang, Eugene and Frieder, Ophir},
  title = {SIDIR: Extending SIR with Detected and Isolated Populations for Pandemic Modeling},
  year = {2020},
  doi = {10.1101/2020.07.20.20157834},
  journal = {medRxiv},
  volume = {10.1101/2020.07.20.20157834v1}
}

@article{li:arxiv2020-parade,
  author = {Li, Canjia and Yates, Andrew and MacAvaney, Sean and He, Ben and Sun, Yingfei},
  title = {PARADE: Passage Representation Aggregation for Document Reranking},
  year = {2020},
  url = {https://arxiv.org/abs/2008.09093},
  journal = {arXiv},
  volume = {abs/2008.09093}
}

@inproceedings{macavaney:emnlp2020-sledge,
  author = {MacAvaney, Sean and Cohan, Arman and Goharian, Nazli},
  title = {SLEDGE-Z: A Zero-Shot Baseline for COVID-19 Literature Search},
  booktitle = {Proceedings of the 2020 Conference on Empirical Methods in Natural Language Processing},
  year = {2020},
  url = {https://arxiv.org/abs/2010.05987},
  doi = {10.18653/v1/2020.emnlp-main.341}
}

@article{macavaney:arxiv2020-abnirml,
  author = {MacAvaney, Sean and Feldman, Sergey and Goharian, Nazli and Downey, Doug and Cohan, Arman},
  title = {ABNIRML: Analyzing the Behavior of Neural IR Models},
  year = {2020},
  url = {https://arxiv.org/abs/2011.00696},
  journal = {arXiv},
  volume = {abs/2011.00696}
}

@inproceedings{flagg:wsdm2021-gait,
  author = {Flagg, Cristopher and Frieder, Ophir and MacAvaney, Sean and Motamedi, Gholam},
  title = {Real-time Streaming of Gait Assessment for Parkinson’s Disease},
  booktitle = {Proceedings of the 14th ACM International Conference on Web Search and Data Mining},
  year = {2021}
}

@inproceedings{macavaney:sdu2021-extr,
  author = {MacAvaney, Sean and Dernoncourt, Franck and Chang, Walter and Goharian, Nazli and Frieder, Ophir},
  title = {Interaction Matching for Long-Tail Multi-Label Classification},
  booktitle = {The AAAI-21 Workshop on Scientific Document Understanding},
  year = {2021},
  url = {https://arxiv.org/abs/2005.08805}
}

@inproceedings{macavaney:ecir2021-tutnir,
  author = {MacAvaney, Sean and Macdonald, Craig and Tonellotto, Nicola},
  title = {IR From Bag-of-words to BERT and Beyond through Practical Experiments: An ECIR 2021 tutorial with PyTerrier and OpenNIR},
  booktitle = {Proceedings of the 43rd European Conference on Information Retrieval Research},
  year = {2021}
}

@inproceedings{xiang:wassa2021-toxic,
  author = {Xiang, Tong and MacAvaney, Sean and Yang, Eugene and Goharian, Nazli},
  title = {ToxCCIn: Toxic Content Classification with Interpretability},
  booktitle = {11th Workshop on Computational Approaches to Subjectivity, Sentiment & Social Media Analysis},
  year = {2021},
  url = {https://arxiv.org/abs/2103.01328}
}

@article{macavaney:arxiv2021-irds,
  author = {MacAvaney, Sean and Yates, Andrew and Feldman, Sergey and Downey, Doug and Cohan, Arman and Goharian, Nazli},
  title = {Simplified Data Wrangling with ir_datasets},
  year = {2021},
  url = {https://arxiv.org/abs/2103.02280},
  journal = {arXiv},
  volume = {abs/2103.02280}
}